Violeta
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The glyoxylate cycle is a truncated Kreb's cycle - see here. It is not the source of endogenous oxalate production though could contribute to it. If there are problems with malate synthase within the cycle, then glyoxylate could accumulate. This in turn could be converted to oxalate.
The pathway for endogenous oxalate production is shown here and discussed here and here
Okay, so according to this study, when phagocytosis of candida causes the enzymes for glyoxalate production.
From the study:
"In C. albicans, phagocytosis also upregulates the principal enzymes of the glyoxylatecycle, isocitrate lyase (ICL1) and malate synthase (MLS1)."
Would that mean that if your body doesn't have the immune system able to kill candida, it wouldn't cause problems and you wouldn't have endogenous oxalate problems?