I still don't understand the objections to the post-Lyme control group, despite trying hard to understand.
My main objection is that they weaken the statistical power of the study. A few of the dodgier investigators have engaged in such behavior before, using multiple control groups. The result is that there needs to be a huge difference in a lab result between the patients and a control group for it to have statistic significance. Anything more nuanced or representing a subgroup is completely lost. And depending on the ethics of those investigators, they will gloss over the lack of power and present the study as a straight-forward null result. I do not want them to have the opportunity to do that again.
My other objection is that the Lyme group introduces uncertainty, instead of reducing it. As
@duncan has said at some length ... are they cured or in remission? Ticks are notorious for not being picky about the pathogens they acquire and transmit, so past and present co-infections are a very real likelihood. That transforms it from "cured Lyme group" into "a bunch of patients with Lyme + X, Y, and/or Z".
Some of those co-infections, such as Bartonella, make Lyme testing look like a picnic by comparison. Mainstream Bartonella testing is widely acknowledged to have an 80% false negative rate ... on average it takes 5 blood tests to get a positive result in someone who is definitely infected.
When comparing ME to something, it should be compared to something which is very well understood. Otherwise, we don't know what we're comparing it to, or what the similarities and differences mean. Generally I would not be opposed to that happening, but it should not be happening in a preliminary exploratory study, especially when the results could impact on Stage II and Stage III of that study, or on prospects for further studies.
The idea behind a
control group is to
control for variables. I don't think you can deny that a Lyme group potentially introduces new variables instead.
A reason given against the post-Lyme control is that the bacterial infection might still be present but simmering, but the same could be said for ME (that an infection is simmering) so that seems perfect to me.
Except that you don't come closer to getting an answer in the case of ME by introducing a similar mystery in the form of Lyme. It would be better to have people who recovered completely from post-viral fatigue after 6 months due to EBV, and now have normal EBV titers.
The issue of whether a patient had Lyme or not won't be an issue if they're using officially recognised tests.
The official tests have a huge false negative rate. That's part of the reason they make a crappy control group. Are they asymptomatic and cured, or asymptomatic with the bacteria still hiding out somewhere? We need to know, if we're going to use them as a basis for interpreting results from ME patients. And the state of Lyme testing is not sufficient to provide any definitive answers.
The post-Lyme patients are healthy controls but a more homogeneous cohort than the standard healthy control because they've all had the same infection
It's unlikely that none of them ever had co-infections. Maybe the Lyme antibiotics wiped them out as well, but maybe not.
And nearly all the population is post-mono or post-herpes.
But most are not post-post-viral fatigue from EBV. Or post-Q-fever.
I understand that there may be many false negative diagnoses, but that's irrelevant for this study.
No, it isn't. They tested positive at some point, but due to inaccuracy of all testing methods, it cannot be guaranteed that they are negative now. All that is known is that they were firmly diagnosed with Lyme at some point, and they were treated. Beyond that, all we can do is guess if the infection was cleared, and no others were present.
I'm only interested in why they are asymptomatic. If they are infectious but asymptomatic, then lets find out why.
That's a completely different trial. The purpose of this trial is to answer questions about ME. The very existence of questions about the Lyme group should be a very strong indication that they are not suitable controls.
I acknowledge that there are 'unknowns' in relation to the post-Lyme group but I can't understand why 'unknowns' necessarily make a control group inappropriate. Unknown factors might give us completely unexpected answers.
Again, because the purpose of a control group is to control for variables. A control group should not be capable of doing anything unexpected.