• Welcome to Phoenix Rising!

    Created in 2008, Phoenix Rising is the largest and oldest forum dedicated to furthering the understanding of and finding treatments for complex chronic illnesses such as chronic fatigue syndrome (ME/CFS), fibromyalgia (FM), long COVID, postural orthostatic tachycardia syndrome (POTS), mast cell activation syndrome (MCAS), and allied diseases.

    To become a member, simply click the Register button at the top right.

Hornig/Lipkin cytokine study out now - press release

Antares in NYC

Senior Member
Messages
582
Location
USA
Distinct plasma immune singatures in ME/CFS present early in the course of the illness

Mady Hornig, José G. Montoya, Nancy G. Klimas, Susan Levine, Donna Felsenstein, Lucinda Bateman, Daniel L. Peterson, C. Gunnar Gottschalk, Andrew F. Schultz, Xiaoyu Che, Meredith L. Eddy, Anthony L. Komaroff, W. Ian Lipkin


my typed abstract, apologies for any errors

ME/CFS is an unexplained incapacitating illness that may affect up to 4 million people in the US alone. There is no validated laboratory test for diagnosis or managment despite global efforts to find biomarkers of the disease. We considered the possibility that inabillity to identify such biomarkers reflected variation in diagnostic criteria and laboratory methods as well as the timing of sample collection during the course of the illness.

Accordingly, we leveraged two large, multicenter cohort studies of ME/CFS to assess the relationship of immune signatures with diagnosis, illness duration and other clinical variables. Controls were frequency matched on key variables known to affect immune status, including season of sampling and geographic site, in addition to age and sex.

We report here distinct alterations in plasma immune signatures early in the course of ME/CFS (n=52) relative to healthy controls (n=340) that are not present in longer duration of the illness (n=246).

Analyses based on duration revealed that early ME/CFS cases had a prominent activation of both pro- and anti-inflammatory cytokines as well as disociation of intercytokine regulatory networks. We found a stronger correlation of cytokine alterations with illness duration than with measures of illness severity, suggesting the immunopathology of ME/CFS is not static. These findings have critical implications for discovery of interventiona strategies and early diagnosis in ME/CFS.
Two of my CFS doctors are in this study! Bravo for them!!!!
Best two doctors that I ever had for this condition, and humane like no other in my 16 years dealing with this nightmare.
 
Last edited:

Gijs

Senior Member
Messages
690
What about patiënts how are longer sick then 3 years? For these patiënt there still will be nothing yet. Thet are still 'grazy''... because there is no test.... This study will also be like XMRV hype, sorry.... replications on cytokines are not working in CFS.
 

Daisymay

Senior Member
Messages
754
Science Media Centre's "Expert reaction to biomarkers for CFS/ME":

http://www.sciencemediacentre.org/expert-reaction-to-biomarkers-for-cfsme/

A paper published in the journal Science Advances has reported the presence of a specific biomarker signature in patients early in the course of CFS/ME, which was not seen in patients with a longer duration of the illness or in healthy individuals. The biomarkers relate to immune signalling messengers.


Dr Diana Prata, Group Leader, Institute of Molecular Medicine (IMM), University of Lisbon and Visiting Lecturer, Centre for Neuroimaging Sciences, King’s College London, said:
“This study advances the field in terms of understanding the pathophysiology of ME/CFS, but regardless of how statistically strong a correlation between two variables (presence of disease and presence of a given substance in the blood) a given test cannot be considered a real diagnostic biomarker, without showing high specificity or high sensitivity – ideally both. That is, it has to get most of the positive cases right or most of the negative cases right, in order to be clinically useful. Furthermore, even then, that doesn’t make it so. Prevalence of both the disease, and the substance, in the population has to be taken into account, to then deduct the so called positive and negative ‘predictive values’: the proportion of the obtained positive and negative test results that are indeed true. For example, if the proportion of patients with the illness or with the specific plasma immune signature is very low, the clinical use decreases substantially.

“These authors did no assessment of these values and thus, the idea from a statement in the press release that that ‘there is unequivocal evidence for a diagnostic biomarker’ is unsubstantiated.

“This specific illness is not in my area of expertise, but I have published a recent review on biomarkers where we had to address similar issues: http://www.ncbi.nlm.nih.gov/pubmed/24877683.”


Prof. Michael Sharpe, Professor of Psychological Medicine, University of Oxford, said:
“Whilst this finding that some patients with CFS/ME have an immune abnormality is potentially interesting, we should treat it with great caution.

“This type of study (a case-control study) is notorious for producing findings that other researchers subsequently fail to replicate.

“Everyone who has worked clinically with patients with CFS/ME knows this is a real illness; this study neither proves nor disproves that observation.”


Dr Esther Crawley, Reader in Child Health, School of Social and Community Medicine, University of Bristol, said:
“Studies of biomarkers are important to help us develop hypotheses about this important illness. In this paper, the differences between those with ‘short’ illness duration of 3 years compared to those with longer illness duration are fascinating and will help researchers develop new treatments and explore factors that predict outcome in adults.

“Whilst these results are important for researchers, it is important for patients to understand that these studies are not currently suitable as a test to diagnose ME/CFS. Although the authors say ‘integration of these immune markers with clinical findings will provide clinicians with a stronger framework for establishing an ME/CFS diagnosis, and, possibly, make it easier to rule out other conditions at an earlier time point’, this paper does not compare these cytokine perturbations with controls who have other illnesses.

“Further work is needed before it will be possible to use these results to rule out other conditions. In addition, patients need to accept that the authors do not claim that they are suitable in the early stage of the illness to predict outcome.”


Prof. Derek Hill, CEO of IXICO plc and Professor of Medical Imaging Science, UCL, said:
“The authors have analyzed stored blood samples and clinical data from several hundred ME sufferers that participated in completed research studies, along with controls subjects who didn’t have ME. The paper reports a number of molecular markers in the blood that are associated with the ME in its various stages. The results that the paper emphasise are from small proteins in the blood called cytokines, but it isn’t clear how wide a range of blood markers they initially looked for: the more molecules you search for in this sort of experiment, the higher the chance that associations will be found by pure chance.

“It is notable that when the authors compared all the patients with ME with all the controls, “no substantive differences were found” and the authors then seem to have further broken down their analysis to look at patients in early and later stages of the disease – and it is in this further analysis of smaller groups that they found significant associations. Sub-group analyses of this type do further risk associations that arise from pure chance. To be confident in the results in this paper, it is important that these or other researchers replicate these findings in the same or preferably other patient with ME. Furthermore, in order to demonstrate that these molecules could be used to help develop new treatments or to diagnose patients, it would be important to work out how the biomarker signals change as the patient gets better or worse, and also how accurate the biomarker separates patients with ME from patients who don’t have ME but have similar clinical symptoms (rather than just comparing with normal controls).

“Discovering a biomarker and turning it into a diagnostic test that is used on patients is comparable to the challenge of discovering and developing a new drug: it can take well over a decade and has a high chance of failure. This paper is an important step forward in identifying candidate biomarkers for ME. But much more work is now needed to demonstrate these findings can be replicated in prospective studies and in demonstrating that the biomarker test performs reliability before regulators would consider the biomarker qualified for the purposes of developing new drugs. And even more work would be requited before it would be approved as a diagnostic test. ”


Prof. Naveed Sattar, Professor of Metabolic Medicine, University of Glasgow, said:
“This study suggests a pattern of inflammatory markers may differentiate early ME/CFS from healthy controls, an intriguing result on the face of it. Whilst the findings are of some interest, the results should be considered preliminary. The study would have benefited from better control of age and also consideration of other simple characteristics which influence body inflammation levels, including, in particular, individual’s body mass index and their smoking habits, both factors which can alter inflammatory status.

“Indeed, we know that simple markers of inflammation can differ by several fold between lean non-smokers and obese smokers, as can an individual’s social status – inflammation levels are higher in less affluent populations due to factors not well described. Hence, the current results should be considered only hypothesis generating rather than definitive and need to be confirmed in better controlled studies in future with very careful matching.”


Prof. Stephen Lawrie, Head of the Division of Psychiatry, University of Edinburgh, said:
“This field – the biology and especially immunology of ME/CFS – has been bedeviled by false dawns for at least 20 years. This is a small study and the fact that the ‘biomarker’ does not internally replicate is a concern. Yes, it could be that there is a different immune profile in acute and chronic ME/CFS but it is at least as likely that the finding in acute patients is down to chance and hence a false positive signal.”


Prof. Peter White, Professor of Psychological Medicine, Queen Mary University of London (QMUL), said:
“This study is impressive when considering the numbers studied and the care taken by the renowned scientists undertaking it. But I think it is premature to conclude that they have found ‘a diagnostic biomarker for disease’, something that would make diagnosis much easier. Only one out of the 51 immune proteins studied was elevated in all cases compared with controls, something that could happen by chance alone. Finding more elevated immune proteins in those with a short duration of illness is less convincing when this was found to be more important than the association with the severity of illness: one of the fundamental tests of a biomarker. I hope the authors will go on to re-examine their data after stratifying their samples by other factors that determine the different sub-groups that most scientists now accept make up this illness. Finally, as the authors themselves suggest, we need to see these results replicated independently. ”


Distinct plasma immune signatures in ME/CFS are present early in the course of illness’ by Hornig et al. published in Science Advances on Friday 27th February.


Declared interests

Prof. Derek Hill: IXICO has no commercial interest in ME or ME biomarkers
Prof. Peter White: Does voluntary work for UK departments of Health and Work and Pensions and Ministry of Defence. Also does paid work for a re-insurance company.
No other interests declared
 
Messages
13,774
Anyone got a
This says more than words.
F1.large.jpg

I vaguely remember @Simon mentioning that displaying results in this way can make them seem more significant than they are? (I need to take the time to understand this stuff better).

I've read almost nothing about this study, but one general concern I have about CFS biomed (and some psych) studies is that they can end up finding evidence of the sort of general things that happen to people who have health problems/are under strain. I expect that people diagnosed with CFS will suffer from a number of different conditions and that abnormalities common across them will also be common in many other people with ill health.

Thinking about what changes people with CFS might be expected to go through, I wonder if these results could reflect the way in which people with CFS push themselves to try to recover/control symptoms in the first few years, and then over time come to take a more relaxed approach with themselves? Totally speculative I know, but it would be interesting to know what sort of results we see from other ill health groups on these tests.
 

Scarecrow

Revolting Peasant
Messages
1,904
Location
Scotland
What about patiënts how are longer sick then 3 years? For these patiënt there still will be nothing yet. Thet are still 'grazy''... because there is no test.... This study will also be like XMRV hype, sorry.... replications on cytokines are not working in CFS.
Not at all. Take a look at the graphic pasted by @A.B.
http://forums.phoenixrising.me/inde...ut-now-press-release.35880/page-2#post-565042

Doesn't look like nothing to me. The abnormalities exist in short and long duration patients. Some cytokines are actually higher in the long duration, although most are lower. Neither group is normal.

The real benefit of this study as far as short duration patients are concerned could be on earlier diagnosis. It's probably a bit premature to be thinking of treatments for either group, based on the findings.

This is the interpretation of David Tuller, New York Times
Patients who had been ill for less than three years had “a prominent activation” of cytokines that influence inflammation in the body, compared with other study subjects, the scientists found. Those sicker for longer than three years exhibited dampened cytokine activity, which the researchers interpreted as a possible sign of “a premature immune-system aging.”
 

Antares in NYC

Senior Member
Messages
582
Location
USA
Science Media Centre's "Expert reaction to biomarkers for CFS/ME":

http://www.sciencemediacentre.org/expert-reaction-to-biomarkers-for-cfsme/

A paper published in the journal Science Advances has reported the presence of a specific biomarker signature in patients early in the course of CFS/ME, which was not seen in patients with a longer duration of the illness or in healthy individuals. The biomarkers relate to immune signalling messengers.

Prof. Michael Sharpe, Professor of Psychological Medicine, University of Oxford, said:
“Whilst this finding that some patients with CFS/ME have an immune abnormality is potentially interesting, we should treat it with great caution.

“This type of study (a case-control study) is notorious for producing findings that other researchers subsequently fail to replicate.

“Everyone who has worked clinically with patients with CFS/ME knows this is a real illness; this study neither proves nor disproves that observation.”

Prof. Stephen Lawrie, Head of the Division of Psychiatry, University of Edinburgh, said:
“This field – the biology and especially immunology of ME/CFS – has been bedeviled by false dawns for at least 20 years. This is a small study and the fact that the ‘biomarker’ does not internally replicate is a concern. Yes, it could be that there is a different immune profile in acute and chronic ME/CFS but it is at least as likely that the finding in acute patients is down to chance and hence a false positive signal.”

Prof. Peter White, Professor of Psychological Medicine, Queen Mary University of London (QMUL), said:
“This study is impressive when considering the numbers studied and the care taken by the renowned scientists undertaking it. But I think it is premature to conclude that they have found ‘a diagnostic biomarker for disease’, something that would make diagnosis much easier. Only one out of the 51 immune proteins studied was elevated in all cases compared with controls, something that could happen by chance alone. Finding more elevated immune proteins in those with a short duration of illness is less convincing when this was found to be more important than the association with the severity of illness: one of the fundamental tests of a biomarker. I hope the authors will go on to re-examine their data after stratifying their samples by other factors that determine the different sub-groups that most scientists now accept make up this illness. Finally, as the authors themselves suggest, we need to see these results replicated independently. ”
Absolutely WRETCHED and DEFENSIVE comments from the psych crowd. The reactions of Pr. Michael Sharpe are particularly inane and idiotic. There, I said it!

“This type of study (a case-control study) is notorious for producing findings that other researchers subsequently fail to replicate.

Ahem.... how about those CBT/GET studies, genius?
 

Antares in NYC

Senior Member
Messages
582
Location
USA
Well, it makes a good headline, even if not accurate! (Esp coming from Lipkin's lab and Stanford.)
I think the headline is deliberate. What they are doing is planting a flag, as in: yes this is biological proof (even though it's been known before), but we won't be denied anymore, and there's no way back from here. This group includes TOP researchers in immunology. "Yuppy flu" no more!
 
Last edited:

user9876

Senior Member
Messages
4,556
Anyone got a


I vaguely remember @Simon mentioning that displaying results in this way can make them seem more significant than they are? (I need to take the time to understand this stuff better).

.

As I understand it the bars on the top with * symbols show the results of significance tests between the bars with more *'s representing a tighter threshold.

Looking at these gives a different view from just the bars charts. But using scatter graphs would be much nicer
 

Simon

Senior Member
Messages
3,789
Location
Monmouth, UK
So this is a surprise: not much difference between cases and controls. There was a pattern of slightlly higher levels in patients than controls, but not much to shout about.
Not really a surprise, as the short duration (high cytokines) and long duration (low cytokines) cancel each other out when combined.

So between-group differences were small, whereas within-group differences were significant.
Well, obviously, having seen the data! What I meant was that this huge cytokine study didn't replicate the findings of cytokine differences between patients and controls seen in many smaller studies, and that was a surprise, to me anyway, and I suspect to the authors too.

I'm pretty sure, though, that the short vs long duration difference was a part of the study from the off, not some data mining to find meaning in the data.
 

Gijs

Senior Member
Messages
690
No one claimed to have discovered a diagnostic biomarker.
They have taken this statement out of contex: ''This study delivers what has eluded us for so long: unequivocal evidence of immunological dysfunction in ME/CFS and diagnostic biomarkers for disease,” says senior author W. Ian Lipkin, MD, also the John Snow Professor of Epidemiology

Why doesn''t this docter response on the first part? Because she must admit this is a real illness.
 

Gingergrrl

Senior Member
Messages
16,171
Sorry for what I know is a stupid question but what is the "Science Media Center" that I keep hearing about in lots of posts? Is this the Simon Wessley school or something different? I am still learning all the UK terms.
 

Scarecrow

Revolting Peasant
Messages
1,904
Location
Scotland
@Gingergrrl, here's what the SMC say about themselves. Someone else will no doubt be able to enlighten you about the connections behind the scenes.

http://www.sciencemediacentre.org/
About Us

The Science Media Centre has its roots in the influential House of Lords Science and Technology Select Committee third report on Science and Society, which wanted to renew public trust in science. Established in 2002, it was originally based in the Royal Institution of Great Britain, until becoming a separate charity in its own right in April 2011. The Centre is now housed in the Wellcome Trust, and believes that scientists can have a huge impact on the way the media cover scientific issues, by engaging more quickly and more effectively with the stories that are influencing public debate and attitudes to science.
The SMC’s philosophy is:
“The media will DO science better when scientists DO the media better.”
 
Last edited:

Antares in NYC

Senior Member
Messages
582
Location
USA
Last edited:

greeneagledown

Senior Member
Messages
213
What about patiënts how are longer sick then 3 years? For these patiënt there still will be nothing yet.

I think the biggest benefit to longer duration patients is that going forward, lots of researchers will probably be making the short duration/long duration distinction in their research, which might bring to light all sorts of interesting physiological abnormalities that would otherwise be obscured. One thing we hear constantly from all the experts in this field is that the heterogeneous nature of this disease is likely messing up the data. Who knows what kind of physiological abnormalities will pop up now that we know to separate short versus long duration patients when comparing against healthy controls?

Another benefit is just strategic. This is getting HUGE press coverage, mostly of the "CFS is real!" variety. It increases our exposure, gets other researchers interested, and most importantly, increases the pressure on NIH to get in the game.

And keep in mind they did find differences between long duration patients and controls -- long duration patients had below-normal levels of some cytokines. Probably can't be used diagnostically but it's something future research can build on.