Here is the paper by Chan and colleagues:
"Elimination of Germinal Center-Derived Self-Reactive B Cells Is Governed by the Location and Concentration of Self-Antigen"
http://www.cell.com/immunity/abstract/S1074-7613(12)00462-1
Whoa,
this is different. The article is easily misinterpreted I think, or wrong. This abstract makes more sense, but I wonder how more sense the full paper would be - it needs to be read.
Here are the key bits: [My bolding]
"Self-reactive GC B cells not eliminated if
target self-antigen is in a distal tissue"
"In the current study, self-reactive B cells generated de novo in the GC failed to survive when their target self-antigen was either expressed ubiquitously or specifically in cells proximal to the GC microenvironment. By contrast,
GC B cells that recognized rare or tissue-specific self-antigens were not eliminated, and could instead undergo positive selection by cross-reactive foreign antigen and produce plasma cells secreting high-affinity autoantibodies."
It does not matter where the infection is.
It is not about the pathogen. Its about the expression of the epitope. The epitope is the amino acid sequence the antibody binds to. Germinal centers are capable of eliminating auto-antibodies if a similar target exists close to them. If the target is far away they do not eliminate the self-antigen.
What this does to my explanation several posts ago is shift the emphasis. A gut infection could possibly result in auto-antibodies to brain tissue. Similarly a brain infection could possibly result in auto-antibodies to gut tissue. A wide spread viral infection, according to the abstract (the paper might be different to the abstract about this), could still do it. This is because if a B cell is hypermutating in for example a germinal center in the gut, that germinal center will only check for autoimmunity in very close tissue in the gut (though this is not really a purposeful activity, its a function of the biology). Target epitopes in the brain tissue will not be checked for unless they are also expressed in the gut. So the gut germinal center will give an all-clear and the B cell survives. Hello to autoimmunity.
So the apparent co-occurance of gut infection and a brain disorder might actually reflect reality. The whole point is that an infection in one part of the body gives rise to autoimmunity somewhere else. Since the gut is a source of many pathogens, gut infection is likely to be a trigger for many cases of autoimmunity.
However the opposite might be true too. A brain infection (such as measles encephalitis) which I had might induce autoimmunity to the gut. This might weaken the gut, leading to worse infections, which might induce autoimmunity in the brain ... and so the cycle continues.
This implies, but does not prove, that it does not matter where the infection is. Once autoimmune issues start then it becomes a cycle of new autoimmune issues. This is most likely in the case where the original autoimmune target is the gut, in other words when the infection is not in the gut. That infection, which generates gut auto-antibodies, would weaken the gut and a following gut infection would then be more severe, leading to greater risk of autoimmunity.
Of course none of this takes into account autoinflammatory pathways, something which I think will be closely intertwined with this idea.
Just to be clear, when I say pathogen I really mean pathogenic target. This includes vaccines.
Bye, Alex