One thing you can try is directly using the program downloaded from https://sourceforge.net/projects/analyzemygenes/ and also download and unzip ten_percent.zip and remarks.zip from https://sourceforge.net/projects/analyzemygenes/files/Databases/ into the same folder.@Valentijn can I be cheeky and ask if you could do the same for me? The only problem is I have tried to upload my raw data file from 23andme but I can't seem to upload the file on here. I am on an iPad I don't know whether that makes any difference. Is there a way I can just copy and paste the Missence mutations data to you? How would find them in my raw data on 23andme? Thank you very much.
Then it can run with your raw text results, and generate a text file or pdf with the rare results. If the text file is opened with Excel (comma separations) then you can sort based on BLOSUM scores to get a shorter list of missense mutations. -4 is mostly likely to cause problems (but often doesn't), and 4 is no change to the gene's product. Then you can look up the mutations on dbSNP or by gene on OMIM.
But if you're struggling with any of that, I'm happy to take a look.