Discussion of issues to be resolved to qualify the antigens for use in the sero-assays.
Need positive subjects in normal donor population.
Need known pos and neg samples.
Don't know levels of antibodies in XMRV pos subjects.
Need an assay to devel clinical control. Need clinical control to validate assay.
Limitation of assay:
Calculated from small sample number.
Assumption of sesro-status (assume most donors are neg, if pos by other test, assume they'll be sero-pos)
Immune profile after infection unknown.
Another one I missed.
Obtained "training set" of samples
77 donors from NCI Frederick RDP
donor plasma from 1990s
39 XMRV pos subjects
Assay to XMRV antigens
Used stat analyses to determine utility of antigens in assay.
Looking for sensitivity, specificity, of course. (ROC curves).
IN and RT curves bad.
CA, TM and SU a bit better. SU curve is encouraging but based on only 1 lot, couldn't replicate with others. Found production error, going back now.
Training sets aren't blinded. 10/39 had reactivity for CA, TM and SU above "noise"
Found 1 non-pt donor pos on all three.
Donor samples from Dr. Alter, assayed for CA, TM and SU, concordance between CA and TM about 5.5% (raw, uncalibrated data, no SU available).
Some subjects are reactive to p12, MA and NC (including donor controls)
Inclusion of antigens reactive in human sera into a positivity algorithm. Maybe 2/3 or 3/3 of CA, TM and SU?
Still working.
Secondary assays: WB, NA tests
Trying to identify pedigreed clinical controls.
Also need samples from experimentally infected animal models.