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Remodeling unhealthful gut microbiomes to fight disease (with peptides)

JES

Senior Member
Messages
1,323
You are what you eat -- right down to the microbiome living in your gut. Diet can affect which microbes are in the intestinal tract, and research has shown that harmful gut microbiome changes can lead to illnesses such as heart disease, obesity and cancer. Today, scientists will report the development of molecules that can change, or remodel, unhealthful gut microbiomes in mice into more healthful ones. The research could also someday be applied to other conditions related to diet. The researchers will present their results at the American Chemical Society (ACS) Fall 2019 National Meeting & Exposition.

"The gut microbiome contains hundreds of different species of bacteria and is where the largest concentration of bacteria living in us resides," says M. Reza Ghadiri, Ph.D., leader of the study. "If we all ate a healthy diet, exercised and didn't age, we wouldn't have problems with our gut microbiome and many diseases. But, that's not how all people live. Current methods aimed at improving the makeup of gut microbiomes have involved prebiotics, probiotics or drug therapies. Our goal was to take a totally new approach -- to remodel the microbiome."

The key to the research is a class of molecules called self-assembling cyclic D, L-?-peptides. They were created in Ghadiri's laboratory originally to kill pathogenic bacteria. Peptides are short chains of amino acids linked together; they are the building blocks of proteins. Ghadiri's peptides are not found in nature and have a highly specific mode of activity and selectivity against different bacterial species.

Read more here.

I find this interesting, as it's the first time I've read about peptides being used in this fashion. There seems to be a lot of claims regarding peptides out there, some of them dubious, but given how difficult it seems to be to "remodel" our gut microbiome, this could provide another way to achieve it, which I think could benefit not only in atherosclerosis, but other diseases like ME/CFS as well.
 

Wishful

Senior Member
Messages
5,751
Location
Alberta
I did see that article, but didn't see a clear connection for ME. Their estimate of the number of genes is really, really vague. "As to how many genes there are in the collective human microbiome, one calculation puts the figure at around 232 million, whereas another resulted in a number comparable to the number of atoms in the universe." I think a better term would be 'lots', since it conveys appropriate vagueness.

It certainly makes it difficult to find the appropriate FMT donor for an individual. If it's one specific gene that would treat a person's health problem, how do you find a bacterial variety that carries that gene (and expresses it) and that also has the other genetic characteristics to survive in that person's gut? To me it seems like a pretty hopeless search. It's no surprise that FMTs aren't a reliable treatment. Some people might get lucky, some might get stuck with something detrimental (the kudzu of bacteria).