Uploading uBiome results to get recommendations

Downloading your uBiome data
After logging into uBiome, you will see an ‘Advanced’ tab on your menu bar.

  • Click it
  • A dropdown menu will appear
  • Click ‘Download’
  • Choices will appear on the left.

  • Click on Download Taxonomy (Json)
  • Depending on your browser, you may see the data in a new tab or be prompted for a name
  • If the above case, a Control- S should bring up a dialog to save it:
  • I usually add .json to the end
Using A Mac
  • MAC’s will often save it as a .webarchive which will not work for an upload. So:
    • Open a Text Editor
    • Copy the entire page and paste it into the text editor.
    • Save the file
You are now ready to upload!

Go to Upload Ubiome data

If the Upload and Consent button is disabled — try again in a few days. Maintenance is on going.

Enter your email and select the file you downloaded above. Then click ‘Upload and Consent’.

REMEMBER to fill in your symptoms so we may match bacteria shifts to symptoms.!

After Upload
A summary will appear. It is important to write down the email or alias used AND the Sample Id to be able to comeback later to review your results when more research data is available.

First Look:
On the menu select ‘Your Overgrowth tree’

This will cause your tree to appear with overgrowths in Red.

Going back to the menu and clicking recommendations, you will see suggestions — based on studies –.

  • In this sample, we see some pretty big weights of what to avoid and what to take!

I’ve included the above image as a clickable table below for readers that are interested in more exploration.

Item Action Avoid Weight Take Weight


Take 0 74.09

Quercetin w. Resveratrol

Take 0 42.43

Cranberry bean flour

Take 0 38.68

Propyl gallate

Take 0 19.81

Tannic acid

Take 0 19.81

Polymannuronic acid

Take 0 11.81

Navy bean

Take 9.37 19.81

Ketogenic diet

Take 0 9.37

Low fat diets

Take 0 9.37


Take 0 9.37

Pomegranate ellagitannins

Take 0 6.32


Take 0 6.03

Vitamin D

Take 0 6.03


Take 0 5.61

Ganoderma lucidum mycelium

Take 0 5.61

High meat diet

Take 0 5.61

Low energy diet/ calorie restriction

Take 0 5.61

Whole-grain barley

Take 0 5.61

High sugar diet

Take 11.26 14.82


Take 0 3.31

L-Glutamic acid

Avoid 3.31 0


Avoid 3.31 0


Avoid 3.31 0

Bifidobacterium pseudocatenulatum LI09 and Bifidobacterium catenulatum LI10

Avoid 5.94 2.44

Cholic acid

Avoid 5.61 0

High fat diet

Avoid 20.63 14.82

Choline deficiency

Avoid 6.03 0


Avoid 6.32 0

Carboxymethyl cellulose

Avoid 9.37 0

Polysorbate 80

Avoid 9.37 0


Avoid 14.82 0

Resistant starch

Avoid 19.81 0

Partial Sleep Deprivation

Avoid 31.66 0

Proton-pump inhibitors

Avoid 39.36 0

Saccharomyces boulardii

Avoid 42.43 0


Avoid 67.85 23.64
Bottom Line

Within minutes a reader can get an analysis done, instead of waiting weeks for me to have time. The analysis above is still lacking the benefits of my deep-dives into bacteria genus, but that will change as I move the data across.

The same person may return in two weeks and find additional suggestions.

This is an education post to facilitate discussing this approach with your medical professionals. It is not medical advice for the treatment of any condition. Always consult with your medical professional before doing any changes of diet, supplements or activity. Some items cites may interfere with prescription medicines.
Likes: Thinktank


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