I had some immunology classes back in med school and there are still several things, I don't really get. Maybe you can help, Prof. Edwards?
Our Prof told us, that autoimmune diseases are often triggered by infections, psychological traumatic events, chronic stress or surgeries. Basically by anything, which stresses the immune system to a large enough amount. He mentioned, that the malfunctioning T and B cells are already there, but a random stressful event and the following immune and cytokine turmoil activates them. Is that just an nice theory, or do we have actual empirical data for this claim?
Also, the molecular mimicry theory was my Prof's favourite, but from what I got out of your posts is, that there isn't actually much evidence for molecular mimicry and much more evidence for random B or T cell events. Bad luck as you call it. Like in cancer (if I remember correctly 2/3 of all cancer mutations are also just bad luck). Is that correct?
If you eradicate almost any B cells, why isn't the body prone to more nasty opportunistic infections? I know, B cells aren't the only defence of the body, but shouldn't the loss of B cells be a larger problem for the immune system? The good plasma cells tend to live longer and continue to produce antibodies against old pathogens, right? But what about new pathogens? With no B cells, new plasma cells cannot develop against new pathogens and new antibodies cannot tag them. So is the rest of the immune defence enough to keep them in check?