Success! I restarted my PC and tried the genes file again and this time it actually ran.
I know
@Valentijn may not be able to reply but I will post the data here anyway. Feel free to PM me if you have any questions
rs17235668,1,C,0.003,CG,,,,,MTOR,
rs1057624,1,C,0.010,CC,,,,,MTHFR/C1orf167,Y
rs35737219,1,A,0.010,AG,,T571M,-1,,MTHFR,
rs11587313,1,G,0.010,GT,,,,,PADI2,
rs16798,1,G,0.010,GT,,,,,DPYD,
rs11125073,2,C,0.010,CT,,,,,
rs2419643,2,G,0.010,AG,,,,,
rs11678166,2,A,0.010,AG,,,,,REL,
rs2860771,2,A,0.010,AG,,,,,
rs6577014,2,C,0.010,CT,,,,,FAHD2A,
rs13014679,2,C,0.010,AC,,,,,FER1L5,
rs12619170,2,C,0.000,AC,,,,,ANKRD36B,
rs7587534,2,G,0.010,AG,,R1245K,2,,VWA3B,
rs10496708,2,T,0.010,CT,,,,,
rs2232346,3,C,0.010,CT,,F262L,0,,IL17RB,
rs11708449,3,G,0.010,AG,,,,,
rs2231223,3,A,0.010,AG,,,,,AP2M1,
rs34577120,3,C,0.010,AC,,,,,PPP1R2,
rs4130382,4,A,0.010,AG,,,,,PIGG,
rs6413413,4,A,0.010,AT,,T20S,1,,ADH1B,
rs12513803,5,A,0.010,AG,,,,,
rs17302526,5,T,0.010,CT,,,,,TRIO,
rs1164694,5,G,0.010,AG,,,,,NSA2,
rs540979,5,T,0.010,CT,,,,,
rs3846717,5,G,0.010,AG,,,,,APC,
rs17689328,5,T,0.010,CT,,,,,SLC22A4/LOC553103,
rs7724670,5,A,0.010,AG,,,,,LOC643201,
rs17282871,6,A,0.010,AG,,,,,CDYL,
rs10484333,6,A,0.010,AG,,,,,
rs9462865,6,C,0.010,CT,,,,,KLHDC3/RRP36,
rs9401670,6,G,0.010,GT,,,,,TRDN,
rs17648408,6,T,0.010,CT,,,,,ECHDC1,
rs1805324,7,T,0.010,CT,,M622I,1,untested,PMS2,
rs17336988,7,A,0.010,AG,,,,,EGFR,
rs4986910,7,G,0.003,AG,,M445T,-1,,CYP3A4,
rs1297632,7,A,0.010,AG,,,,,
rs4647904,8,A,0.010,AG,,,,,FGFR1,
rs17666791,10,C,0.010,CT,,,,,MYO3A,
rs11204267,10,G,0.010,AG,,,,,
rs12283985,11,T,0.010,CT,,,,,PPFIBP2,
rs11568482,11,A,0.010,AT,,I216F,0,,SLC22A8,
rs12802869,11,G,0.010,GT,,,,,
rs7119270,11,A,0.010,AG,,,,,PAAF1,
rs12721043,11,A,0.003,AC,,A161S,1,,APOA4,
rs9332869,11,T,0.010,CT,,,,,
rs10840932,12,C,0.010,CT,,,,,
rs11540149,12,T,0.010,CT,,,,,VDR,
rs682732,12,A,0.010,AC,,,,,PPM1H,
rs1799954,13,T,0.002,CT,,R2034C,-3,other,BRCA2,
rs17619183,13,C,0.010,AC,,,,,
rs3093921,14,G,0.010,AG,,D235G,-1,,PARP2,
rs17778186,14,A,0.010,AG,,,,,FOXN3,
rs11629789,15,C,0.010,CT,,,,,CHRM5/AVEN,
rs4313770,15,T,0.010,GT,,,,,RASGRP1,
rs6161,15,T,0.001,CT,,E156K,1,,CYP11A1,
rs17601226,15,C,0.010,CT,,,,,ALPK3,
rs11466045,16,G,0.010,AG,,D438T,-1,Uncertain significance,MEFV,
rs8053266,16,T,0.010,CT,,,,,ABCC1,
rs58073789,16,T,0.010,CT,,R610K,2,,ABCC6,
rs12920057,16,C,0.010,CT,,,,,
rs35874481,17,A,0.010,AG,,,,,SCARF1,
rs8176320,17,T,0.010,CT,,,,,BRCA1,
rs12945560,17,T,0.010,CT,,,,,MPP3,
rs28730837,17,A,0.010,AG,,A332V,0,Pathogenic,MPO,
rs4926123,19,T,0.010,CT,,,,,
rs17661437,20,A,0.010,AG,,,,,RALGAPA2,
rs1801122,22,A,0.010,AC,,P550T,-1,,CSF2RB,
rs13056402,22,T,0.010,CT,,,,,XPNPEP3,
rs5909140,X,A,0.010,AG,,,,,
rs5952515,X,T,0.010,GT,,,,,MAGIX,
rs17301297,X,A,0.010,AG,,,,,ZC4H2,
rs11798978,X,T,0.010,GT,,,,,NHSL2,
rs12848140,X,G,0.005,AG,,,,,CAPN6,
rs6568025,X,C,0.010,CT,,,,,ZCCHC16,
rs5930575,X,G,0.010,AG,,,,,HS6ST2,